Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020758.1 Corchorus olitorius cultivar O-4 contig20791, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26475

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2474--2524
27
2.0
26
88
7
77
41
5
13
39
1.69
2722--2978
126
2.0
122
84
9
322
41
11
15
31
1.82
14863--14901
17
2.3
17
100
0
78
64
0
35
0
0.94
15292--15335
21
2.1
21
86
0
61
13
40
9
36
1.76
15562--15636
7
10.6
7
78
18
66
44
0
1
54
1.08
15562--15636
10
7.4
10
71
13
55
44
0
1
54
1.08
15668--15745
33
2.4
33
93
0
129
16
35
34
12
1.87
15810--15854
21
2.1
21
83
0
54
35
11
40
13
1.80
17568--17639
19
3.8
18
77
17
67
30
2
6
59
1.38
20718--20785
26
2.6
27
84
11
88
58
2
1
36
1.22
20757--20812
17
3.3
17
85
5
69
55
3
3
37
1.35
20745--20851
38
2.8
37
72
15
103
60
2
1
34
1.22
20969--21015
21
2.2
21
85
7
60
40
2
0
57
1.11
21213--21251
19
2.1
19
95
0
69
33
0
30
35
1.58
21786--21890
29
3.6
29
67
14
79
36
16
17
30
1.91
21756--21915
60
2.7
60
87
3
216
38
13
18
30
1.89
21960--22121
60
2.7
59
83
6
193
31
16
15
37
1.90
21960--22060
31
3.3
30
70
13
82
30
16
13
38
1.88

Tables:   1

The End!