Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020762.1 Corchorus olitorius cultivar O-4 contig20795, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8579

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40--1894
649
2.8
661
79
8
1766
34
13
14
36
1.86
4--2037
335
6.2
332
75
10
1522
33
14
15
36
1.87
3119--3286
31
5.6
30
71
11
137
33
20
18
26
1.96
3123--3285
60
2.7
60
95
0
281
34
20
18
25
1.96
3328--3428
31
3.3
31
69
15
102
24
19
17
37
1.94
3328--3487
60
2.7
60
88
4
227
26
18
16
37
1.93

Tables:   1

The End!