Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020763.1 Corchorus olitorius cultivar O-4 contig20796, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24404

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
380--421
2
21.0
2
100
0
84
50
0
0
50
1.00
2351--2613
41
6.3
41
89
4
357
30
12
19
37
1.89
2331--2613
126
2.3
123
86
6
401
30
12
19
37
1.89
2709--2743
16
2.2
16
90
10
54
11
20
17
51
1.75
7302--7525
111
2.0
111
93
0
385
46
14
13
25
1.82
9092--9120
7
4.1
7
100
0
58
72
13
13
0
1.13
9476--9612
51
2.7
51
89
1
204
37
17
11
33
1.86
12759--12850
31
2.9
32
80
13
111
21
13
15
50
1.78
12759--12851
33
2.9
32
73
13
93
21
12
15
50
1.77

Tables:   1

The End!