Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020778.1 Corchorus olitorius cultivar O-4 contig20811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4579

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114--156
18
2.4
18
88
0
59
79
2
11
6
1.02
104--159
29
2.0
28
86
6
78
78
3
10
7
1.06
1190--1247
17
3.8
17
70
29
67
58
0
0
41
0.98
1201--1256
27
2.1
27
100
0
112
55
0
0
44
0.99
3020--3076
28
2.0
29
89
3
89
45
26
10
17
1.81
2750--3438
344
2.0
344
99
0
1351
37
19
15
27
1.92
3364--3420
28
2.0
29
89
3
89
45
26
10
17
1.81

Tables:   1

The End!