Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002078.1 Corchorus olitorius cultivar O-4 contig02078, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7031

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--44
2
18.5
2
94
5
67
47
0
2
50
1.15
4310--4372
22
2.9
22
76
9
74
38
14
12
34
1.84
4660--4706
22
2.3
20
86
13
62
46
12
10
29
1.76
4721--4793
22
3.4
21
76
3
74
38
17
6
36
1.77
4908--5123
22
10.1
21
71
18
128
37
16
8
37
1.80
4924--5108
44
4.3
44
74
15
147
38
15
9
36
1.79

Tables:   1

The End!