Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020784.1 Corchorus olitorius cultivar O-4 contig20817, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28022

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2432--2476
22
2.0
22
100
0
90
40
4
15
40
1.67
5411--5459
3
16.3
3
85
8
55
0
24
36
38
1.56
5423--5469
24
2.0
24
86
0
67
2
17
36
44
1.60
5420--5481
27
2.3
27
88
0
88
3
19
35
41
1.67
5404--5462
18
3.3
18
85
0
82
1
20
35
42
1.62
7376--7431
12
4.4
12
76
12
58
0
16
33
50
1.45
21887--21932
24
1.9
24
82
8
58
28
26
23
21
1.99
24075--24179
49
2.1
49
96
0
192
51
14
15
19
1.76

Tables:   1

The End!