Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020812.1 Corchorus olitorius cultivar O-4 contig20845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50545

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3348--3590
101
2.4
101
81
10
293
22
16
22
39
1.92
4389--4435
23
2.0
23
88
8
69
29
14
14
40
1.87
9453--9497
21
2.1
21
95
0
81
57
2
13
26
1.48
12464--12497
16
2.1
16
88
0
50
11
23
23
41
1.87
28602--28646
6
7.5
6
89
0
54
22
48
17
11
1.78
28602--28646
12
3.8
12
87
0
63
22
48
17
11
1.78
29643--29674
3
10.3
3
93
6
55
65
0
31
3
1.08
33655--33723
28
2.4
29
78
9
70
50
8
2
37
1.48
46369--48018
331
5.0
331
85
3
2243
33
15
15
35
1.89
46369--48018
662
2.5
658
89
2
2565
33
15
15
35
1.89
48016--50545
328
7.7
329
84
6
3173
32
15
15
35
1.90
50076--50104
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!