Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020813.1 Corchorus olitorius cultivar O-4 contig20846, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5109

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
755--872
59
2.0
59
98
0
227
29
22
19
28
1.98
1249--1277
2
14.5
2
100
0
58
48
0
0
51
1.00
818--3209
332
7.2
331
84
5
3047
32
15
15
36
1.89
826--3209
663
3.6
657
86
4
3182
32
15
15
36
1.89
3200--3312
25
4.5
26
75
17
105
27
12
23
37
1.90
3510--3550
4
10.2
4
89
0
64
51
24
0
24
1.49
3508--3554
16
2.9
16
90
0
76
51
23
0
25
1.49

Tables:   1

The End!