Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020821.1 Corchorus olitorius cultivar O-4 contig20854, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64991

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
546--570
12
2.1
12
100
0
50
28
16
0
56
1.41
586--618
2
16.5
2
100
0
66
51
0
0
48
1.00
1973--2017
23
2.0
23
82
8
56
31
6
15
46
1.72
4753--4809
30
1.9
30
96
0
105
28
22
1
47
1.61
7792--7839
22
2.1
23
92
3
80
18
2
12
66
1.33
30738--30795
19
2.9
19
87
5
80
36
12
22
29
1.90
39354--39378
6
4.2
6
100
0
50
16
16
16
52
1.76
44305--44362
21
2.9
19
84
5
71
31
20
12
36
1.89
45020--45074
21
2.8
20
80
5
67
30
20
10
38
1.87
58733--58785
20
2.7
20
100
0
106
33
15
13
37
1.86

Tables:   1

The End!