Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020830.1 Corchorus olitorius cultivar O-4 contig20863, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4792

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1230--1271
21
2.0
21
100
0
84
52
9
4
33
1.55
1067--1399
180
1.9
179
84
6
451
36
14
11
37
1.82
1246--3153
323
5.9
322
87
3
2716
35
15
15
33
1.90
1246--3153
644
3.0
644
92
2
3120
35
15
15
33
1.90
1246--3153
967
2.0
967
87
3
2804
35
15
15
33
1.90
2630--3664
536
1.9
541
84
6
1405
34
17
17
31
1.93
3179--4792
325
5.1
320
81
6
1785
34
17
14
33
1.91

Tables:   1

The End!