Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020831.1 Corchorus olitorius cultivar O-4 contig20864, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100386

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--1435
319
4.5
318
86
3
1826
34
17
14
34
1.90
14526--14562
4
9.0
4
88
5
56
2
27
0
70
1.01
17561--17610
2
25.5
2
82
11
50
52
4
2
42
1.31
38411--38454
22
2.0
21
83
12
54
29
13
20
36
1.91
48493--48544
23
2.3
23
96
0
95
23
19
0
57
1.40
65327--65366
16
2.5
17
88
12
66
17
25
5
52
1.64
69334--69391
19
2.9
19
84
5
71
29
20
12
37
1.89
82397--82433
7
4.8
8
90
9
51
0
10
0
89
0.49
96968--97163
87
2.2
89
87
2
270
43
11
14
29
1.81
98878--98914
18
2.2
17
86
13
51
70
2
27
0
1.01
100348--100382
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!