Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020842.1 Corchorus olitorius cultivar O-4 contig20875, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4143

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
301--450
65
2.3
66
83
3
196
43
16
9
31
1.79
467--658
22
8.7
22
77
5
147
37
13
18
30
1.90
459--637
66
2.7
66
76
3
180
36
12
20
29
1.90
488--699
22
9.6
22
73
11
89
37
13
17
31
1.89
584--699
44
2.6
44
83
5
128
39
11
14
34
1.82
626--719
22
4.2
22
79
6
75
41
11
14
31
1.82
798--1407
332
1.8
329
83
5
800
34
17
14
32
1.91
1732--1765
3
11.3
3
87
12
52
2
29
0
67
1.05

Tables:   1

The End!