Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020878.1 Corchorus olitorius cultivar O-4 contig20911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17163

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6934--6961
14
2.0
14
100
0
56
21
21
14
42
1.88
9599--9627
14
2.0
15
93
6
51
27
10
20
41
1.85
13093--13197
31
3.5
31
75
10
126
34
20
20
25
1.96
13097--13319
60
3.7
60
95
0
365
33
19
19
27
1.96
13217--13316
31
3.3
31
66
20
93
36
18
19
27
1.94
13188--13285
29
3.3
29
66
20
85
31
17
21
29
1.96
13390--13491
29
3.4
29
70
15
91
27
17
18
36
1.94
13357--13522
60
2.8
59
84
5
208
27
18
18
36
1.93

Tables:   1

The End!