Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020881.1 Corchorus olitorius cultivar O-4 contig20914, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9695

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
487--1277
319
2.5
316
81
5
869
35
16
13
34
1.87
1440--2096
324
2.0
322
82
5
781
37
14
14
33
1.87
3522--3697
88
2.0
88
97
0
334
33
21
14
30
1.93
5153--5559
40
10.2
40
92
2
608
33
26
6
34
1.81
5153--5559
79
5.1
78
93
3
634
33
26
6
34
1.81
5153--5559
119
3.4
117
90
6
586
33
26
6
34
1.81

Tables:   1

The End!