Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020885.1 Corchorus olitorius cultivar O-4 contig20918, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53509

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--31
2
15.5
2
100
0
62
48
0
0
51
1.00
60--112
21
2.7
20
81
18
58
52
1
18
26
1.56
1358--1393
6
6.0
6
93
0
63
63
2
16
16
1.42
6100--6133
6
5.7
6
96
0
59
17
0
17
64
1.29
7691--7727
6
6.2
6
93
0
65
29
32
37
0
1.58
12892--12923
8
4.2
8
84
15
50
28
21
15
34
1.94
33143--33194
27
2.0
25
85
7
68
28
15
40
15
1.88
37590--37675
43
2.0
43
100
0
172
37
18
18
25
1.94
38013--38044
2
16.0
2
100
0
64
50
0
0
50
1.00
45863--45903
21
2.0
21
85
0
55
19
21
9
48
1.77

Tables:   1

The End!