Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020891.1 Corchorus olitorius cultivar O-4 contig20924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6021

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
51
0
0
48
1.00
5561--5803
2
123.0
2
84
2
294
44
3
52
0
1.21
5803--5895
13
7.8
12
67
26
56
41
39
3
15
1.63
5803--5901
7
15.3
7
73
14
88
42
39
3
15
1.62
5803--5879
32
2.4
32
84
2
93
41
38
3
15
1.66
5829--5895
13
5.2
13
80
10
84
44
38
1
14
1.55
5946--5988
10
4.1
10
77
11
50
48
9
41
0
1.35
5920--5988
16
4.4
16
76
5
70
52
10
36
1
1.44
5988--6017
7
4.3
7
95
0
51
43
46
0
10
1.37

Tables:   1

The End!