Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020896.1 Corchorus olitorius cultivar O-4 contig20929, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25414

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8225--8436
41
5.2
41
76
4
135
46
15
14
24
1.83
8255--8434
81
2.2
80
79
5
184
46
15
13
25
1.82
13711--13827
51
2.3
51
96
0
216
35
17
6
40
1.77
15012--15059
22
2.2
22
92
0
78
33
27
10
29
1.90
16161--16196
18
2.0
18
88
0
54
5
16
2
75
1.12
17004--17046
19
2.4
18
85
11
61
44
9
4
41
1.57
18338--18368
14
2.2
14
100
0
62
19
22
9
48
1.78
20173--20658
170
2.9
160
86
5
548
34
16
20
28
1.95
20295--20663
170
2.2
170
91
0
594
34
15
21
28
1.94
20797--21298
69
7.3
69
91
1
749
28
15
28
27
1.96
22128--22327
50
4.0
50
88
2
260
35
15
18
31
1.92
22910--22948
6
6.7
6
94
5
71
15
0
15
69
1.20
22916--22994
14
5.3
15
76
11
74
15
0
13
70
1.16
23377--23414
16
2.2
17
90
9
60
10
10
0
78
0.95

Tables:   1

The End!