Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020911.1 Corchorus olitorius cultivar O-4 contig20944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3556

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
606--645
17
2.3
18
80
20
50
75
7
10
7
1.20
1334--1874
36
15.4
36
82
5
617
17
20
18
43
1.88
1340--1834
107
4.8
100
84
7
394
17
19
18
44
1.87
1439--1874
107
4.1
107
87
3
572
18
20
18
43
1.88
1439--1880
71
6.2
71
88
3
573
18
19
18
43
1.88
1439--1880
143
3.1
143
87
2
602
18
19
18
43
1.88
2144--2981
30
28.1
30
84
4
953
21
14
18
45
1.85
3443--3499
27
2.2
26
90
3
87
17
14
28
40
1.88

Tables:   1

The End!