Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020918.1 Corchorus olitorius cultivar O-4 contig20951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14659

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130--224
46
2.2
42
83
9
111
35
6
21
36
1.79
571--631
30
2.0
30
84
6
79
44
4
14
36
1.67
1757--1789
16
2.0
17
94
5
59
15
12
6
66
1.42
2020--2070
25
2.1
25
85
10
70
33
13
5
47
1.67
4739--4779
21
2.0
21
90
0
64
17
48
24
9
1.76
4897--4947
21
2.5
20
78
9
57
21
43
23
11
1.85
8696--8851
78
2.0
78
89
0
240
38
35
4
21
1.74

Tables:   1

The End!