Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020920.1 Corchorus olitorius cultivar O-4 contig20953, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13497

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--111
2
14.0
2
100
0
56
50
0
0
50
1.00
317--343
2
13.5
2
100
0
54
51
0
0
48
1.00
448--626
93
2.0
90
87
8
258
32
11
2
53
1.51
1263--1294
16
2.0
16
93
0
55
6
15
37
40
1.73
5196--5250
25
2.2
25
87
6
76
54
1
3
40
1.28
7586--7625
2
20.0
2
100
0
80
50
0
0
50
1.00
8506--8606
22
4.6
21
71
10
69
39
9
11
38
1.75
9729--9778
14
3.7
14
75
25
54
40
6
2
52
1.38

Tables:   1

The End!