Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020921.1 Corchorus olitorius cultivar O-4 contig20954, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9705

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
651--682
15
2.2
14
94
5
55
65
0
12
21
1.25
1462--1988
40
13.4
40
86
4
671
34
10
22
33
1.87
1462--2005
78
6.9
79
85
5
608
35
9
21
33
1.87
2085--2755
145
4.8
140
91
2
960
32
16
21
29
1.95
3924--3969
7
6.9
7
85
5
51
21
19
2
56
1.52
3975--4027
6
8.7
6
80
15
56
0
3
11
84
0.73
3987--4027
12
3.5
11
87
12
64
0
0
12
87
0.53
7600--7632
15
2.2
15
100
0
66
33
12
24
30
1.91

Tables:   1

The End!