Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020932.1 Corchorus olitorius cultivar O-4 contig20965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29288

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3299--3476
90
2.0
89
93
1
302
50
7
6
35
1.57
5038--5136
33
3.0
33
98
0
189
25
30
20
24
1.99
5352--5535
88
2.1
88
93
2
316
48
8
11
30
1.70
5678--5736
4
14.8
4
96
0
109
50
22
0
27
1.49
5722--5757
2
18.0
2
88
0
54
50
5
0
44
1.25
6471--6564
45
2.2
43
88
7
138
38
21
5
35
1.76
7350--7697
171
2.0
171
96
0
633
43
15
18
22
1.88
24342--24381
20
2.0
20
100
0
80
30
15
15
40
1.87

Tables:   1

The End!