Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020939.1 Corchorus olitorius cultivar O-4 contig20972, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11344

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1034--1059
2
13.0
2
100
0
52
50
0
0
50
1.00
1118--1261
22
6.6
20
74
14
92
38
11
9
40
1.74
1161--1260
43
2.3
44
83
8
123
41
12
7
40
1.69
3938--4040
43
2.4
44
88
1
145
38
10
9
40
1.73
3982--4136
65
2.4
64
80
5
168
33
16
9
40
1.82
3938--4136
22
9.1
22
73
5
145
34
15
9
40
1.80
4068--4145
22
3.7
21
82
5
77
24
20
11
43
1.85

Tables:   1

The End!