Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020951.1 Corchorus olitorius cultivar O-4 contig20984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25670

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1231--1265
2
17.0
2
94
5
61
48
2
0
48
1.16
5806--5846
22
2.0
22
90
9
68
21
24
19
34
1.97
9241--9269
5
5.8
5
100
0
58
20
0
0
79
0.74
16917--16963
24
2.0
24
100
0
94
42
21
17
19
1.89
16941--17064
66
1.9
66
100
0
248
46
15
20
17
1.84
22964--23025
30
2.1
30
100
0
124
61
12
9
16
1.56
23983--24042
29
2.1
29
100
0
120
60
13
10
16
1.59

Tables:   1

The End!