Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020952.1 Corchorus olitorius cultivar O-4 contig20985, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17233

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3286--3404
47
2.5
47
97
1
220
30
7
29
32
1.85
6226--6300
27
2.7
28
87
4
98
21
14
26
37
1.92
11006--11038
16
2.1
16
94
0
57
24
6
21
48
1.72
11089--11187
19
5.4
18
76
13
96
28
5
24
42
1.75
11089--11187
38
2.7
38
83
11
127
28
5
24
42
1.75
11156--11220
27
2.5
25
80
9
76
23
3
27
46
1.67

Tables:   1

The End!