Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020956.1 Corchorus olitorius cultivar O-4 contig20989, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28643

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3886--3945
15
4.1
15
79
8
61
46
1
0
51
1.10
5729--5791
30
2.0
32
87
6
94
33
17
6
42
1.74
11039--11368
178
1.9
178
87
3
486
34
16
13
35
1.88
25455--25798
96
3.7
94
84
5
461
25
23
25
25
2.00
25641--25812
87
2.0
86
93
3
292
26
23
24
25
2.00
28187--28216
15
1.9
16
93
6
53
50
13
0
36
1.42

Tables:   1

The End!