Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020967.1 Corchorus olitorius cultivar O-4 contig21000, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16113

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2524--2549
12
2.2
12
100
0
52
69
7
15
7
1.35
3107--3142
18
1.9
18
88
5
54
36
22
2
38
1.69
8062--8103
15
2.7
15
92
3
66
71
7
7
14
1.29
8862--8892
12
2.5
12
94
5
53
67
9
12
9
1.41
14656--14754
28
3.7
27
77
9
103
19
13
24
43
1.86
14656--14754
27
3.7
26
77
5
99
19
13
24
43
1.86

Tables:   1

The End!