Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020977.1 Corchorus olitorius cultivar O-4 contig21010, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7234

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1302--1514
65
3.4
62
86
4
234
34
16
15
33
1.91
1367--1567
30
6.7
30
87
4
253
32
18
16
31
1.94
1367--1746
60
6.5
60
85
8
428
31
17
18
32
1.95
1551--1585
18
1.9
18
94
0
61
25
14
22
37
1.92
1522--1615
47
2.0
48
95
2
172
28
15
20
35
1.94
1569--1746
30
5.9
30
92
0
257
29
17
20
32
1.96
1370--1737
197
1.9
198
87
1
549
31
18
18
31
1.95
1462--1675
107
2.0
108
92
0
358
29
18
19
32
1.96
1418--1735
167
1.9
168
90
0
512
30
18
19
31
1.96
3678--3712
2
17.5
2
100
0
70
48
0
0
51
1.00
7073--7142
35
2.0
35
88
5
106
31
14
27
27
1.95

Tables:   1

The End!