Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020982.1 Corchorus olitorius cultivar O-4 contig21015, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10179

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
199--391
29
6.3
29
81
10
188
39
20
18
21
1.93
301--374
37
2.0
38
94
2
132
39
17
21
21
1.93
4288--4312
13
1.9
13
100
0
50
20
8
8
64
1.46
8763--8798
13
2.6
14
86
8
56
52
0
0
47
1.00
8975--9013
11
3.5
11
100
0
78
0
35
53
10
1.35
8975--9014
6
7.2
6
83
16
59
0
35
52
12
1.39
9327--9375
24
2.0
24
88
0
71
42
26
18
12
1.85

Tables:   1

The End!