Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020984.1 Corchorus olitorius cultivar O-4 contig21017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9139

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
428--487
16
3.8
16
77
4
59
8
11
40
40
1.72
1237--1288
22
2.4
22
83
6
61
36
17
5
40
1.73
4880--4981
29
3.6
29
92
2
154
26
18
17
37
1.93
4880--4996
29
4.2
27
88
2
126
25
19
20
34
1.96
8085--8110
11
2.4
11
100
0
52
84
0
15
0
0.62
8738--8809
31
2.3
31
95
0
126
31
15
13
38
1.87
8833--8873
21
2.0
21
85
9
57
39
9
14
36
1.79

Tables:   1

The End!