Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020986.1 Corchorus olitorius cultivar O-4 contig21019, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15666

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11907--11944
2
19.0
2
100
0
76
50
0
0
50
1.00
12616--12836
50
4.4
50
91
3
356
36
11
27
23
1.90
12670--12800
23
5.3
23
63
16
66
37
11
29
22
1.89
13057--13211
28
5.5
28
89
1
247
14
18
23
44
1.85
13057--13211
57
2.7
57
90
1
258
14
18
23
44
1.85
13057--13211
85
1.8
84
92
1
265
14
18
23
44
1.85
13648--13687
21
1.9
21
84
0
53
75
7
10
7
1.20
15274--15309
19
1.9
19
88
5
56
52
16
5
25
1.65

Tables:   1

The End!