Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020989.1 Corchorus olitorius cultivar O-4 contig21022, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14738

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2371--2609
43
5.7
43
84
7
328
43
25
9
20
1.82
2371--2617
84
2.9
84
95
1
424
42
25
9
21
1.83
2731--2756
2
13.0
2
100
0
52
50
0
0
50
1.00
4076--4250
35
4.8
35
71
15
122
54
4
21
20
1.61
4089--4202
34
2.9
39
75
20
112
56
4
20
19
1.59
4090--4160
20
3.5
20
71
17
65
54
2
21
21
1.57
4155--4272
21
5.6
21
76
15
109
51
5
20
22
1.66
4306--4377
31
2.2
32
90
7
110
59
2
12
25
1.46
4324--4385
31
2.0
31
93
0
106
59
4
11
24
1.51
4369--4454
26
3.2
26
82
12
95
60
3
18
17
1.50
4577--4635
26
2.2
27
84
9
84
50
0
22
27
1.49
4587--4640
26
2.1
26
92
0
90
51
1
24
22
1.57
8541--8575
8
4.4
8
86
13
54
0
11
0
88
0.51
8539--8576
9
4.1
9
83
16
51
0
13
0
86
0.56
12093--12133
18
2.4
17
87
4
55
65
0
17
17
1.27

Tables:   1

The End!