Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021016.1 Corchorus olitorius cultivar O-4 contig21049, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13362

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6436--6525
27
3.3
28
74
10
78
35
27
18
17
1.94
6551--6715
90
1.9
87
84
6
224
40
15
18
25
1.90
6885--7365
50
9.5
50
90
0
755
24
27
11
37
1.89
6885--7365
101
4.8
101
90
1
759
24
27
11
37
1.89
6885--7365
152
3.2
152
92
0
786
24
27
11
37
1.89
7275--7354
23
3.3
23
65
19
63
18
30
12
38
1.88
7594--8237
64
10.1
64
87
0
903
27
21
15
35
1.93
8220--8499
67
4.2
67
87
2
373
26
21
15
37
1.93
10693--10731
14
2.7
14
84
4
51
30
15
10
43
1.80
12520--12555
19
1.9
18
88
5
54
27
22
8
41
1.82

Tables:   1

The End!