Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021024.1 Corchorus olitorius cultivar O-4 contig21057, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11565

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94--137
16
2.8
16
85
0
61
9
15
36
38
1.80
2785--2932
38
3.9
38
92
1
235
22
35
18
23
1.96
2785--2932
77
1.9
75
90
2
233
22
35
18
23
1.96
6288--6324
6
6.2
6
93
0
56
54
27
0
18
1.44
6354--6501
77
1.9
75
86
2
206
23
34
18
23
1.96
6354--6501
38
3.9
38
89
1
208
23
34
18
23
1.96

Tables:   1

The End!