Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021030.1 Corchorus olitorius cultivar O-4 contig21063, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17976

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7681--7749
34
2.0
34
94
0
120
43
11
23
21
1.85
10101--10162
3
20.7
3
100
0
124
66
0
0
33
0.92
10364--10391
14
2.0
14
100
0
56
64
0
14
21
1.29
12246--12271
3
8.7
3
100
0
52
69
0
0
30
0.89
16187--16263
31
2.5
31
93
0
127
32
14
18
35
1.91
16685--16714
12
2.5
12
94
0
51
26
26
16
30
1.97

Tables:   1

The End!