Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021044.1 Corchorus olitorius cultivar O-4 contig21077, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30053

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
512--546
15
2.3
15
100
0
70
22
14
20
42
1.88
3393--3488
51
1.9
50
91
6
158
28
11
17
42
1.84
5765--5793
5
5.8
5
100
0
58
0
79
0
20
0.74
7199--7224
2
13.0
2
100
0
52
0
50
0
50
1.00
7368--7410
15
2.8
15
80
16
52
4
32
0
62
1.15
26523--26562
21
1.9
21
100
0
80
17
30
17
35
1.93

Tables:   1

The End!