Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021051.1 Corchorus olitorius cultivar O-4 contig21084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13782

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4959--5009
27
1.9
26
88
4
75
31
0
0
68
0.90
8589--8624
9
3.9
9
85
7
54
41
27
0
30
1.56
8590--8626
19
1.9
19
100
0
74
43
29
0
27
1.55
8619--8659
20
2.0
20
86
9
57
43
19
4
31
1.72
12368--12416
25
2.0
25
100
0
98
38
32
8
20
1.82

Tables:   1

The End!