Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021053.1 Corchorus olitorius cultivar O-4 contig21086, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18853

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8217--8317
31
3.3
30
76
5
105
32
22
10
33
1.89
9544--9573
14
2.1
15
93
6
53
63
13
3
20
1.43
12079--12158
40
2.0
40
97
0
151
18
25
31
25
1.98
12394--12486
47
2.0
47
100
0
186
30
6
21
41
1.78
12494--12548
28
2.0
28
96
0
101
40
25
9
25
1.85
14655--14722
27
2.5
27
92
4
102
19
14
47
19
1.83
14655--14711
27
2.1
27
100
0
114
19
14
45
21
1.85
16750--16788
20
2.0
20
89
0
60
12
2
17
66
1.35
17588--17627
3
13.0
3
94
5
71
67
0
0
32
0.91

Tables:   1

The End!