Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021056.1 Corchorus olitorius cultivar O-4 contig21089, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12550

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1989--2102
59
1.9
58
86
8
160
33
14
19
33
1.91
3920--4331
203
2.0
202
96
2
763
43
8
10
36
1.70
4404--4450
25
1.9
25
95
4
87
55
8
6
29
1.55
4441--4521
39
2.0
40
90
2
128
38
3
7
50
1.48
8519--8641
22
5.5
22
82
4
113
39
13
11
34
1.81
8520--8663
44
3.3
44
79
0
144
38
13
12
35
1.82
8813--8887
22
3.4
21
82
10
89
36
20
6
37
1.79
8910--9013
22
4.7
22
81
2
111
32
12
12
42
1.80
8909--9037
22
5.9
21
77
6
105
30
12
13
44
1.80

Tables:   1

The End!