Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021070.1 Corchorus olitorius cultivar O-4 contig21103, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31352

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--240
67
3.6
67
90
1
383
37
12
22
26
1.90
223--411
64
2.9
64
82
3
211
35
14
22
28
1.93
626--854
50
4.5
50
91
1
350
38
11
25
24
1.89
835--915
26
3.1
25
76
10
99
39
12
24
23
1.89
828--915
27
3.3
26
75
12
99
39
11
25
23
1.88
626--906
100
2.8
100
86
3
303
38
12
25
24
1.90
1536--1632
48
2.0
48
93
0
167
22
24
10
42
1.85
5113--5153
21
2.0
21
85
9
57
39
9
14
36
1.79
9370--9438
27
2.6
27
90
4
104
17
17
24
40
1.90
12671--12772
51
2.0
51
96
0
186
30
8
27
33
1.87
15272--15310
17
2.4
17
86
4
53
33
15
5
46
1.68
23553--23588
19
1.9
18
88
5
54
27
22
8
41
1.82

Tables:   1

The End!