Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021089.1 Corchorus olitorius cultivar O-4 contig21122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7176

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
505--530
13
2.0
13
100
0
52
69
0
30
0
0.89
2925--2995
31
2.2
33
82
9
94
46
15
14
23
1.82
3271--3322
25
2.1
25
82
7
61
25
1
1
71
1.07
4017--4065
22
2.2
22
85
0
71
16
14
22
46
1.82
4949--4986
11
3.5
11
89
10
51
39
0
2
57
1.12
5339--5438
31
3.3
31
76
10
107
30
23
12
35
1.91
6793--6889
31
3.2
31
70
11
92
35
12
20
31
1.90

Tables:   1

The End!