Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021090.1 Corchorus olitorius cultivar O-4 contig21123, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30971

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--70
15
2.2
15
94
5
57
0
9
12
78
0.97
1067--1261
97
2.0
97
97
0
372
40
5
10
44
1.61
1251--1319
23
3.2
22
64
19
56
42
7
10
40
1.66
1230--1354
41
3.0
41
97
0
241
46
5
9
38
1.60
1099--1297
97
2.1
97
82
4
242
42
4
12
40
1.62
4459--4532
31
2.4
31
90
0
112
36
9
22
31
1.86
4506--4582
28
2.7
29
83
6
93
33
5
24
36
1.78
5411--5481
35
2.0
35
97
0
133
52
0
25
22
1.48
8493--8588
47
2.0
47
97
0
183
39
4
22
33
1.74
10232--10292
32
1.9
32
96
0
113
52
19
6
21
1.68
19495--19626
66
2.0
66
89
0
201
44
23
11
20
1.83
21568--21597
15
2.1
14
93
6
51
33
6
16
43
1.74
30920--30964
21
2.4
19
85
14
58
68
2
8
20
1.27

Tables:   1

The End!