Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021099.1 Corchorus olitorius cultivar O-4 contig21132, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16423

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1067--1122
12
4.8
12
73
20
55
37
3
8
50
1.51
2379--2424
21
2.1
22
88
4
67
43
8
23
23
1.82
2381--2491
44
2.5
44
77
8
118
37
9
18
35
1.82
2385--2532
22
6.8
21
73
13
86
38
9
14
37
1.78
10077--10105
1
29.0
1
100
0
58
100
0
0
0
0.00
11965--12038
32
2.4
31
86
4
105
45
16
16
21
1.84
12537--12630
45
2.2
44
88
7
140
38
21
4
36
1.73

Tables:   1

The End!