Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021100.1 Corchorus olitorius cultivar O-4 contig21133, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69639

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9839--9879
8
5.1
8
100
0
82
39
24
0
36
1.56
9831--9879
24
2.0
24
92
7
82
36
24
0
38
1.56
10968--11024
25
2.4
24
85
5
71
29
5
5
59
1.41
13057--13116
31
1.9
31
89
0
93
33
23
3
40
1.71
13154--13314
85
1.9
85
96
0
295
32
13
1
52
1.50
14523--14610
26
3.4
26
73
17
85
47
0
7
44
1.32
23077--23206
64
2.1
62
95
2
233
22
13
9
55
1.66
45191--45233
22
2.0
22
95
0
77
30
25
4
39
1.76
46569--46635
32
2.1
32
88
0
98
22
19
22
35
1.96
59490--59531
6
7.0
6
88
0
66
2
64
14
19
1.39
59485--59531
12
3.8
12
88
2
58
4
63
12
19
1.44
59621--59664
22
2.0
22
86
0
61
43
2
0
54
1.12
62816--62863
3
16.0
3
100
0
96
33
0
0
66
0.92
68593--68629
19
2.0
19
89
5
58
35
0
0
64
0.94

Tables:   1

The End!