Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021108.1 Corchorus olitorius cultivar O-4 contig21141, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22137

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1467--1533
29
2.3
29
84
0
89
53
5
2
37
1.41
2147--2191
22
2.0
23
91
4
74
40
4
11
44
1.60
2251--2301
27
1.9
26
88
4
75
62
5
7
23
1.44
2400--2427
13
2.2
13
100
0
56
53
0
21
25
1.46
5926--5950
5
5.0
5
100
0
50
20
0
0
80
0.72
10031--13835
331
11.6
330
78
6
3325
37
15
14
33
1.87

Tables:   1

The End!