Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021117.1 Corchorus olitorius cultivar O-4 contig21150, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23832

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--73
31
2.1
31
91
5
103
60
14
6
18
1.54
202--248
21
2.2
20
85
10
67
12
29
12
44
1.80
627--763
68
2.0
68
97
2
258
27
32
8
32
1.86
1320--1383
31
2.1
31
91
5
103
60
14
6
18
1.54
14296--14566
100
2.7
99
94
0
461
23
16
22
36
1.94
14302--14566
99
2.7
100
94
0
460
24
16
22
36
1.94
14500--14772
140
1.9
141
85
3
372
24
20
20
33
1.97
14641--15054
180
2.3
176
83
6
476
25
17
21
35
1.95
23012--23116
31
3.5
30
75
15
83
40
22
15
21
1.91
23397--23459
26
2.4
26
100
0
126
23
22
23
30
1.99

Tables:   1

The End!