Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021129.1 Corchorus olitorius cultivar O-4 contig21162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45082

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
437--479
21
2.1
20
83
12
52
23
0
2
74
0.93
13210--13250
18
2.3
18
87
8
57
2
34
31
31
1.71
13721--13764
23
2.0
22
90
4
70
54
0
31
13
1.39
14073--14108
7
5.1
7
89
0
54
47
0
2
50
1.15
19280--19346
31
2.3
28
85
10
89
44
11
25
17
1.83
38154--38185
17
1.9
16
93
6
55
68
3
25
3
1.18

Tables:   1

The End!