Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021140.1 Corchorus olitorius cultivar O-4 contig21173, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26562

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1735--1779
18
2.5
18
100
0
90
46
15
13
24
1.82
2007--2068
30
2.1
30
90
0
97
46
6
20
25
1.74
8259--9374
321
3.4
321
79
9
1225
32
14
17
36
1.90
9871--9908
19
2.0
20
94
5
69
57
2
0
39
1.12
18375--18405
14
2.2
14
100
0
62
32
19
6
41
1.77
20356--21195
330
2.6
318
79
9
881
35
17
13
33
1.89
21260--22736
319
4.6
321
79
8
1160
34
16
14
33
1.90
22493--22971
267
1.8
265
83
7
639
36
17
12
33
1.87
22758--26562
322
11.8
318
79
7
3484
35
17
14
32
1.90

Tables:   1

The End!