Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021141.1 Corchorus olitorius cultivar O-4 contig21174, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71608

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4189--4244
29
1.9
29
85
7
78
41
17
14
26
1.88
8137--11702
652
5.4
646
76
8
2848
37
15
14
33
1.88
8137--11675
335
10.8
330
76
9
2633
37
15
14
33
1.88
34486--34652
82
2.0
82
100
0
334
25
23
11
39
1.89
44572--44618
17
2.8
17
83
0
58
44
17
8
29
1.78
45959--45991
15
2.2
15
100
0
66
27
6
18
48
1.71
46279--46345
31
2.2
31
97
0
125
26
10
5
56
1.56
47642--47787
39
3.7
38
87
5
204
41
22
7
28
1.81
62384--62409
5
5.2
5
100
0
52
61
0
0
38
0.96

Tables:   1

The End!