Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021151.1 Corchorus olitorius cultivar O-4 contig21184, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4063

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
646--788
49
3.0
47
82
10
162
51
5
16
27
1.66
2063--2100
9
4.3
9
90
3
60
31
23
0
44
1.54
2063--2100
18
2.2
17
95
4
67
31
23
0
44
1.54
3420--3611
15
12.7
15
74
12
151
12
23
26
37
1.91
3420--3615
30
6.5
30
82
8
202
12
24
25
37
1.90
3420--3615
45
4.3
45
80
11
195
12
24
25
37
1.90

Tables:   1

The End!